MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Staphylococcus aureus
STF.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 123
bases: 2,698,428 bps
CDS: 2,464
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 60
misc RNA:
Total features: 2,534
Total number of protein coding genes annotated/found:
2,464
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Items 1 - 20
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA)
Range ^
Gene Product Name
SEQF5004|JADGKH010000030.1
SEQF5004_01455
Genome Viewer
NA
AA
90/30
1674-1585
hypothetical protein
SEQF5004|JADGKH010000087.1
SEQF5004_00920
Genome Viewer
NA
AA
93/31
38342-38434
hypothetical protein
SEQF5004|JADGKH010000074.1
SEQF5004_01105
Genome Viewer
NA
AA
93/31
10485-10577
hypothetical protein
SEQF5004|JADGKH010000031.1
SEQF5004_02266
Genome Viewer
NA
AA
96/32
1937-1842
hypothetical protein
SEQF5004|JADGKH010000094.1
SEQF5004_02013
Genome Viewer
NA
AA
102/34
2013-1912
hypothetical protein
SEQF5004|JADGKH010000020.1
SEQF5004_02526
Genome Viewer
NA
AA
102/34
82532-82633
hypothetical protein
SEQF5004|JADGKH010000070.1
SEQF5004_00629
Genome Viewer
NA
AA
105/35
41847-41743
hypothetical protein
SEQF5004|JADGKH010000042.1
SEQF5004_00767
Genome Viewer
NA
AA
105/35
143280-143176
putative protein.1
SEQF5004|JADGKH010000022.1
SEQF5004_02081
Genome Viewer
NA
AA
105/35
59878-59982
hypothetical protein
SEQF5004|JADGKH010000014.1
SEQF5004_01619
Genome Viewer
NA
AA
108/36
8625-8732
hypothetical protein
SEQF5004|JADGKH010000076.1
SEQF5004_00082
Genome Viewer
NA
AA
111/37
1467-1357
hypothetical protein
SEQF5004|JADGKH010000087.1
SEQF5004_00905
Genome Viewer
NA
AA
111/37
22953-22843
hypothetical protein
SEQF5004|JADGKH010000076.1
SEQF5004_00167
Genome Viewer
NA
AA
114/38
57460-57347
hypothetical protein
SEQF5004|JADGKH010000067.1
SEQF5004_00243
Genome Viewer
NA
AA
114/38
53946-53833
50S ribosomal protein L36
SEQF5004|JADGKH010000095.1
SEQF5004_02116
Genome Viewer
NA
AA
114/38
1062-949
hypothetical protein
SEQF5004|JADGKH010000082.1
SEQF5004_01529
Genome Viewer
NA
AA
117/39
19834-19950
hypothetical protein
SEQF5004|JADGKH010000052.1
SEQF5004_01698
Genome Viewer
NA
AA
117/39
87919-87803
hypothetical protein
SEQF5004|JADGKH010000095.1
SEQF5004_02123
Genome Viewer
NA
AA
123/41
3465-3587
hypothetical protein
SEQF5004|JADGKH010000073.1
SEQF5004_02291
Genome Viewer
NA
AA
126/42
19336-19211
hypothetical protein
SEQF5004|JADGKH010000076.1
SEQF5004_00083
Genome Viewer
NA
AA
129/43
1666-1538
hypothetical protein
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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